bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2022_orf2 Length=118 Score E Sequences producing significant alignments: (Bits) Value 5478.CAGL0B01203 130 8e-30 > 5478.CAGL0B01203 Length=88 Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 63/83 (75%), Positives = 71/83 (85%), Gaps = 0/83 (0%) Query 25 GKGTGSFGRRHGKTHFLCLRCGRRSYHVQKKTCASCGYPSAKKRTYNWSEKAKRRHTTGT 84 GKGT SFG+RH K+H LC RCGRRS+HVQKKTCASCGYPSAK R+YNW +KAKRRHTTGT Sbjct 2 GKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCASCGYPSAKTRSYNWGQKAKRRHTTGT 61 Query 85 GRMRYLKTLPRRAKNQFREGTVA 107 GRMRYLK + RR KN F+ GT + Sbjct 62 GRMRYLKHVARRFKNGFQSGTAS 84 Lambda K H 0.323 0.135 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22460540320 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40