bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1994_orf1
Length=159
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFB0620w 119 2e-26
> 5833.PFB0620w
Length=154
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 88/137 (64%), Gaps = 0/137 (0%)
Query 23 MASLEETAKVFQNKFETMIKEITILSLPMQKKSFQCCVSCFDSHKQDPEKIAECINQCHE 82
+ +L + FQ+K + M+ I+ SLP QKKSF CCV+CFD++ D E I +C+N C +
Sbjct 13 ITNLTKRTNEFQSKIDGMLNNISTESLPFQKKSFMCCVNCFDTYNTDFETIGKCVNNCQK 72
Query 83 PSQSFNRVLQREVEGLQTNIESCQKICFNRLAPKLEGASSQTEKTAIEREKDECFVQCFT 142
++ F +V+Q E++ LQ N++SCQ+ CF + +P ++S + IE+E + C V+CF
Sbjct 73 GTEHFVQVVQNEMQNLQNNLQSCQQSCFYKYSPNYAKSNSNIDGPTIEKEMETCVVKCFD 132
Query 143 SNIPIIAEIRDRLKRRI 159
+ P++ EI DRL + +
Sbjct 133 KHEPMLPEISDRLHKTL 149
Lambda K H
0.323 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 26246233818
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40