bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1977_orf2 Length=265 Score E Sequences producing significant alignments: (Bits) Value 8090.ENSORLP00000015837 100 3e-20 > 8090.ENSORLP00000015837 Length=357 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 114/240 (47%), Gaps = 51/240 (21%) Query 12 YGGPPYPAACGGPYGGMAP-PYPPVS-PAYPAAGGGPSPVYGKPA---------GSTPGS 60 YG P +P A GP G AP PYPP+ P P G +G+P +P Sbjct 65 YGQPGFPQA--GP--GFAPGPYPPMGFPQMPYPQGPYQQGFGQPGFPVDPMGVPADSPAY 120 Query 61 MEMGSPP-APSDDTKITDHISVQIRHAFVRKVLGILAVQILFTFGIASVFGFVPTLRTFL 119 + G P +D+ KI +R AF+RKV +L VQ++ TF ++F F + F+ Sbjct 121 HDDGPPSYGDNDEFKIGGLEDKTVRRAFIRKVFLVLTVQLVVTFSFVAIFTFSDDAKIFV 180 Query 120 LQNYWL-----------AIVAAVCGL-------------VLQLASSW-----------ES 144 +N W+ I + CG +L L+ S+ E+ Sbjct 181 RRNPWVYYTSYASFLVCLIALSCCGDFRRKYPGNFIALGILTLSLSYMVGMIASFYDTET 240 Query 145 FLIAIGSTFVVVVGLMLFTCQTKYDFTGCGTYLFVAVLCLMIFGILSIFFHNKIVHLVYS 204 +IA+G T V ++LF+ QTKYDFT C LFV ++ LMIF IL IF NKI+HLVY+ Sbjct 241 VIIAVGITAGVCFTVVLFSLQTKYDFTSCRGVLFVCLIVLMIFSILCIFIRNKIMHLVYA 300 Lambda K H 0.326 0.143 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 83755957455 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40