bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1930_orf1 Length=128 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_1070 87.0 1e-16 > 5807.cgd2_1070 Length=106 Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/105 (49%), Positives = 75/105 (71%), Gaps = 1/105 (0%) Query 21 MAPK-EKKTKEQIAAAAAAGSKKSKKKWSKGKSKDKLNYAVMFDAGTLEKFLSEVPKMKL 79 M PK EKKTKEQIAAAAAAG + +KKWSKGK KDK N++V+FD T ++F S+V K +L Sbjct 1 MPPKGEKKTKEQIAAAAAAGGRAKRKKWSKGKQKDKANHSVLFDKKTADRFHSDVLKSRL 60 Query 80 VTPFSICERFRINASLARRGIRELYRQQQLRPLGDQHHSHYIFTR 124 +TP + + ++NAS AR +R+ + ++P+G+Q H I+T+ Sbjct 61 LTPAVVVNQLKVNASAARAMLRDCESKGIIKPVGEQTHGQMIYTK 105 Lambda K H 0.322 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22424899233 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40