bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1915_orf2 Length=146 Score E Sequences producing significant alignments: (Bits) Value 4932.YPR016C 159 3e-38 > 4932.YPR016C Length=245 Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 72/103 (69%), Positives = 86/103 (83%), Gaps = 0/103 (0%) Query 44 MAIRTHFESSNEVGVFGKLTNSYCLVASGGSEHFYSAIEAELGPHIPVVHASVAGTAVIG 103 MA RT FE+SNE+GVF KLTN+YCLVA GGSE+FYSA EAELG IP+VH ++AGT +IG Sbjct 1 MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIG 60 Query 104 RVCVGNKHGLLVPSSTSDGELQQLRNSLPDGVSVRRVEERLSA 146 R+ GN+ GLLVP+ T+D ELQ LRNSLPD V ++RVEERLSA Sbjct 61 RMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSA 103 Lambda K H 0.325 0.138 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22393349475 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40