bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1910_orf3 Length=552 Score E Sequences producing significant alignments: (Bits) Value 9913.ENSBTAP00000000184 353 9e-96 > 9913.ENSBTAP00000000184 Length=492 Score = 353 bits (906), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 205/506 (40%), Positives = 288/506 (56%), Gaps = 64/506 (12%) Query 35 LPSILDAIGCTPLVCLSRVGTAAGVSCQLLGKCEFLSAGGSMKDRIARDMIVTAEASGRL 94 LP IL IG TP+V ++++G G+ C+LL KCEF +AGGS+KDRI+ MI AE G + Sbjct 7 LPDILKKIGDTPMVRINKIGRNFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAEREGTI 66 Query 95 APGAALIEPTSGNTGIGIALVAAVKGYRSVAVMPKKMSAEKQSIMRALGSMILRTPTKAA 154 PG +IEPTSGNTGIG+AL AAVKGYR + VMP+KMS EK ++RALG+ I+RTPT A Sbjct 67 KPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSTEKVDVLRALGAEIVRTPTNAR 126 Query 155 WDDQTSHIALSIRLKEEMERQRKEKKKDDSNDCYETPEKETPDELQIACILDQYRNPANP 214 +D SH+ ++ RL+ E+ ILDQYRN +NP Sbjct 127 FDSPESHVGVAWRLRNEIPNSH---------------------------ILDQYRNASNP 159 Query 215 ISHFFGTGPELLHQCGMQLDMVVICTGTGGSLTGIGRRIKLALPNCLVVAVDPEGSILAN 274 ++H+ T E+L QC +LDM+V GTGG++TG+ R++K P C +V VDPEGSILA Sbjct 160 LAHYDITAEEILQQCDGRLDMLVASAGTGGTITGVARKLKEKCPGCKIVGVDPEGSILAE 219 Query 275 P---NEQPGKPYLVEGIGYDFVPTVLDRDVADFWVKVNDAESLLCSRLLIRLEGMLVGGS 331 P N+ Y VEGIGYDF+PTVLDR V D W K ND E+ +R+LI EG+L GGS Sbjct 220 PEELNQTEQTAYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFAFARMLIAQEGLLCGGS 279 Query 332 SGAALAGALKAIERMGWKDDSSKRIAMVLPDGSRNYTSKFVCDEWMAEKGFLERSELSRQ 391 SG+A++ A+KA + + +R ++LPD RNY SKF+ D+WM +KGF++ E+S + Sbjct 280 SGSAMSVAVKAAQEL----QEGQRCVVILPDSVRNYMSKFLSDKWMLQKGFMKEEEISVK 335 Query 392 YEQYSNMSVQSLQ-------LPRLTFVSSDSSLKEAAALLVQSPQPILAVIEPGAAEDAT 444 + ++ VQ L LP +T + L+E Q+P V E G Sbjct 336 RPWWWHLQVQELSLSAPLTVLPTVTCEHTIEILREKG--FDQAP----VVDESG------ 383 Query 445 QNGTAPRQMVTGSVTQKALLMAL--GEMPSSAPIGEIADTETPVYNIGTPLSLLAQSLEL 502 ++ G VT +L +L G++ S + ++ + + PL L+ LE+ Sbjct 384 --------VILGMVTLGNMLSSLLAGKVQPSDQVCKVIYKQFKQIYLTDPLGKLSHILEM 435 Query 503 HPFLFIESDGI-IRAAVESSQLLQAF 527 F + + I R ESS+ F Sbjct 436 DHFALVVHEQIQYRCHGESSKRQMVF 461 Lambda K H 0.316 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 245189545547 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40