bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1907_orf2 Length=190 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0660c 151 1e-35 > 5833.PFE0660c Length=245 Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 69/155 (44%), Positives = 104/155 (67%), Gaps = 0/155 (0%) Query 28 HIQLRRGQVQPVVLTMGDPKRVDEVAALCDSAEPLTFNREFKSANVVKDGQKFTVISHGI 87 H+++ + Q+ PVVL +GDP RVD++ +CDS L +NRE+KS GQKF +SHG+ Sbjct 7 HLKISKEQITPVVLVVGDPGRVDKIKVVCDSYVDLAYNREYKSVECHYKGQKFLCVSHGV 66 Query 88 GCCSSMICFEELIKLGAKCIIRAGTCGSMKPDQVKRGDICVPFAAARDNDVCDLYIPPRM 147 G +CFEEL + GAK IIRAG+CGS++PD +KRGDIC+ AA R++ V L I Sbjct 67 GSAGCAVCFEELCQNGAKVIIRAGSCGSLQPDLIKRGDICICNAAVREDRVSHLLIHGDF 126 Query 148 PAVATPRVFQSLLESGKQLGIPLRQGIALTNGLFY 182 PAV V+ +L + ++L +P+ GI++++ ++Y Sbjct 127 PAVGDFDVYDTLNKCAQELNVPVFNGISVSSDMYY 161 Lambda K H 0.324 0.141 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 42433428525 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40