bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1814_orf1
Length=362
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0124 138 3e-31
> 5833.PF08_0124
Length=802
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 156/320 (48%), Gaps = 48/320 (15%)
Query 52 VTVQELRAERKKLLSEHFGYSNDNNPFGDRLLAEPFVWKKKNLLLQAAG-KKHATTVNAL 110
+TV+EL+ ER+ L+ +HF Y+++ NPFGD L+ PFVWK KN + KK T N+L
Sbjct 200 MTVKELKKERENLMKKHFNYTDECNPFGDNTLSTPFVWKLKNKYEKIKNHKKIKLTTNSL 259
Query 111 LTTSVSKVQEIKSVKKRREEREAEEQLMQAQREELQREKEREHFQDYFEKEEVFLRQMHM 170
L VSK+ EI+ VKKRRE+RE E+QL++ R + +++K + + ++Y EKE +F +
Sbjct 260 LENCVSKINEIEQVKKRREDREKEKQLIEDHRLQFEKQKNQINIKEYMEKEHLFFFNQEI 319
Query 171 KKTEIRAEQNREQPIDFIVKGLRMLNGERFEKVSV----LPVPPHEVFDCFNK--EPMTV 224
+ R + QPID ++++ GE + SV +P FNK E +
Sbjct 320 HFSNKRIKHKDIQPIDIFRTAIQIMKGEEDVQKSVGINNYTMP-------FNKILEGLRE 372
Query 225 QMIEEMLSDVKLHIGVDTTAVDKDYQDFWQALLVLTKDALERAERKQKVLEELRNNSSAD 284
+ + +KL D ++ Y+ FW ALL K L++ E K K NN D
Sbjct 373 KELVNCERQIKLFQMHDKMFYEEKYEKFWNALLFFCKYYLDKIELKGK-----ENNYIDD 427
Query 285 AAAQAAAILANNTSVGDVRDADSGIAVGVTSDITAILSGKSPEELDALKEGIKLKLETEE 344
NT + I + K+ +EL + IK K+ EE
Sbjct 428 -----------NTDIK----------------IESFFLNKTYDELVKYEYKIKEKILMEE 460
Query 345 --DVDTAYWESILQKVPLFR 362
D D YW IL K+P ++
Sbjct 461 STDNDVNYWNMILCKIPYYK 480
Lambda K H
0.312 0.128 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 138660866961
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40