bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1791_orf1 Length=590 Score E Sequences producing significant alignments: (Bits) Value 5833.PFB0210c 389 2e-106 > 5833.PFB0210c Length=504 Score = 389 bits (998), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 201/471 (42%), Positives = 291/471 (61%), Gaps = 3/471 (0%) Query 74 QFVLVAVLGSFQFGYSFSALNTSKAIIIADFDWCKGDANHFIDCSNGVLYGSLITTAVFI 133 ++VL A + SF FGY S LNT K I+ +F+WCKG+ + ++CSN + S + +VFI Sbjct 28 KYVLSACIASFIFGYQVSVLNTIKNFIVVEFEWCKGEKDR-LNCSNNTIQSSFLLASVFI 86 Query 134 GLTFGCLLAGPVTNFGRRVALILTNLLFLVSSALAAAAEGVASLFLARLYQGLAVGLATV 193 G GC +G + FGRR++L++ F + S L + ++ ARL G +GL TV Sbjct 87 GAVLGCGFSGYLVQFGRRLSLLIIYNFFFLVSILTSITHHFHTILFARLLSGFGIGLVTV 146 Query 194 CVPMYISEFTPDSSRGFYGTLHQLLITIGILVATLLGLAFGSPPTDTDFTYKVSLFQQCW 253 VPMYISE T +G YG +HQL IT GI VA +LGLA G P D T ++ F + W Sbjct 147 SVPMYISEMTHKDKKGAYGVMHQLFITFGIFVAVMLGLAMGEGP-KADSTEPLTSFAKLW 205 Query 254 WRFMLAFPAAVSIVAILLLWLVYTTESPHFLMHQGRKNTATALLREILGKEDVSHEVQTI 313 WR M FP+ +S++ IL L + + E+P+FL +GR + +L++I ++V + I Sbjct 206 WRLMFLFPSVISLIGILALVVFFKEETPYFLFEKGRIEESKNILKKIYETDNVDEPLNAI 265 Query 314 DVAICQQKVLEAESLSLGKAMTFPIYRHVLLLAFFLSAFQQFTGINILVANSNKLYTSLN 373 A+ Q + + SLSL A+ P YR+V++L LS QQFTGIN+LV+NSN+LY Sbjct 266 KEAVEQNESAKKNSLSLLSALKIPSYRYVIILGCLLSGLQQFTGINVLVSNSNELYKEF- 324 Query 374 IDASLVTGLSVVFGFVNVLMTVPAIFLMDRLGRRTLLLSGCFGQAASTIIALIANLVDRH 433 +D+ L+T LSVV VN LMT PAI+++++LGR+TLLL GC G + + IAN ++R+ Sbjct 325 LDSHLITILSVVMTAVNFLMTFPAIYIVEKLGRKTLLLWGCVGVLVAYLPTAIANEINRN 384 Query 434 NTGVQWLTVACIYVFVISFAVGYGPVLWVYLHEIFPPEIKQTGASVASAINAVATIIVVL 493 + V+ L++ +V +ISFAV YGPVLW+YLHE+FP EIK + AS+AS +N V IIVV Sbjct 385 SNFVKILSIVATFVMIISFAVSYGPVLWIYLHEMFPSEIKDSAASLASLVNWVCAIIVVF 444 Query 494 PSDFVLTSDMRVMLGICGGTSLIAFIISFIFMKETAGLSIDESPYFKGKRR 544 PSD ++ ++ + S++ F F F+KET G I SPY + R Sbjct 445 PSDIIIKKSPSILFIVFSVMSILTFFFIFFFIKETKGGEIGTSPYITMEER 495 Lambda K H 0.327 0.140 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 265708754472 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40