bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1787_orf1 Length=110 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_3770 152 2e-36 > 5807.cgd3_3770 Length=711 Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 73/89 (82%), Positives = 82/89 (92%), Gaps = 0/89 (0%) Query 21 LKADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYEAITEPEKLKTKPELFIRLI 80 ADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYE++T+PE+LK+ E+ IR+I Sbjct 19 FNADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPEQLKSNEEMHIRII 78 Query 81 PDKANNTLTIEDSGIGMTKAELVNNLGTL 109 PDK NNTLTIEDSGIGMTK EL+NNLGT+ Sbjct 79 PDKVNNTLTIEDSGIGMTKNELINNLGTI 107 Lambda K H 0.312 0.133 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23096258976 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40