bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1744_orf1
Length=471
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI0820c 134 1e-29
> 5833.PFI0820c
Length=388
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 11/217 (5%)
Query 102 DEATAERLKRATDSLTKEQLKMLLARACSHYPAVENALYALIEADPSSRRLMIRNVPYTA 161
DE+ AE+L+R L+KEQL +LA + + + + + PS+RRLM+RN+P++
Sbjct 93 DESEAEKLRRLIAPLSKEQLIDILATSALIHEDIREKCNEAVASSPSTRRLMVRNIPFST 152
Query 162 TEVSLRQTVEAYGPIEDFKLVIDRNTGLNKGFAFVTYKSMGDVARVLQSEVTIDGRPLSI 221
+ + E++G IED +++ G +KG+ FVT+K + V + L+S T+D + L +
Sbjct 153 RDEQFLKYFESFGEIED-GIIVREKEGRSKGYGFVTFKYVESVQKCLKSSHTLDNKELQV 211
Query 222 KLASQQDQGAAMKRAFLGPNQGCRLFVRNVPDTCDERRLKQEFEGFGTVRETAIVRNRDG 281
+L + F Q +LFVRN+ + L+ FE +G + E I+ + +G
Sbjct 212 RLVAD---------PFTDHYQN-KLFVRNLSQKTNVSTLRSIFEKYGKLEECVIIHDNEG 261
Query 282 SSKGYGFVVFEDPEALMKAASQAQRVIDGQVTFVSVA 318
SKGYGF+ F P K Q +R+ID +V F+ A
Sbjct 262 KSKGYGFLTFSSPREAFKVMQQPERIIDNRVVFLHFA 298
Lambda K H
0.312 0.124 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 199217143071
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40