bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1742_orf2 Length=177 Score E Sequences producing significant alignments: (Bits) Value 5691.Tb09.160.4310 195 4e-49 > 5691.Tb09.160.4310 Length=992 Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 96/169 (56%), Positives = 120/169 (71%), Gaps = 5/169 (2%) Query 1 AFTTGKRPENGGIPHDVFGMTTASVETYVRGIYEKLGLDEREMTRIQTGGPDGDLGANAL 60 +FTTGK GGIPHD + MTT SV T VRG+YEKLGLDE T+ QTGGPDGDLG+N + Sbjct 597 SFTTGKDASLGGIPHDTYAMTTRSVRTMVRGVYEKLGLDEASQTKFQTGGPDGDLGSNEI 656 Query 61 LQTKSKTLAVVDGAGVVYDPEGLNAEELRRLARLRFKGEKTSSMLFDSSLLSPKGFKVPQ 120 L +K KTLAV+D + ++DPEGLN EEL+RLA R + FD S LS KGF V Sbjct 657 LLSKEKTLAVLDISASLFDPEGLNKEELKRLATARKQLRD-----FDKSKLSSKGFLVLT 711 Query 121 DARDITLPDGTYVASGIEFRNNFHLSKFAVCDLFNPCGGRPASVNPRNV 169 +++TLPDGT+V+ G+ FR+ FHL+K++ D+F PCGGRP SV NV Sbjct 712 GDKNVTLPDGTHVSDGVSFRDEFHLTKYSAADVFVPCGGRPRSVTLANV 760 Lambda K H 0.317 0.137 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 35195248557 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40