bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1718_orf1 Length=120 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0191155 167 6e-41 > 44689.DDB_0191155 Length=292 Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 80/121 (66%), Positives = 103/121 (85%), Gaps = 2/121 (1%) Query 1 RYKKLDKIGEGTYGVVYKAQD-TNGNLCALKKIRLEAEDEGIPSTAIREISLLKELHHPN 59 +Y K++K+GEGTYG+VYKA++ G + ALK+IRL++EDEG+P TAIREISLLKEL HPN Sbjct 3 KYSKIEKLGEGTYGIVYKAKNRETGEIVALKRIRLDSEDEGVPCTAIREISLLKELKHPN 62 Query 60 IVRLMDVVHTDKRLTLVFEYLDQDLKEVLDDCRPSGLEPQVVKSFLYQLLKGIAYCHQHR 119 IVRL DV+HT+++LTLVFEYLDQDLK+ LD+C +P +KSF+YQLLKG+A+CH HR Sbjct 63 IVRLHDVIHTERKLTLVFEYLDQDLKKYLDECGGEISKP-TIKSFMYQLLKGVAFCHDHR 121 Query 120 V 120 V Sbjct 122 V 122 Lambda K H 0.321 0.140 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23080484097 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40