bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1717_orf1
Length=145
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd2_3700 216 2e-55
> 5807.cgd2_3700
Length=1552
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 96/145 (66%), Positives = 117/145 (80%), Gaps = 0/145 (0%)
Query 1 LSLYNNNLHGILADEMGLGKTIQTIALLAYLKEFKNNGGPHLIIVPLSTLSNWADEFERW 60
LSLYNN LHGILADEMGLGKT+QTIALL YL E K+N GPHL++VPLSTL NW EFE W
Sbjct 590 LSLYNNKLHGILADEMGLGKTVQTIALLTYLYEHKDNQGPHLVVVPLSTLPNWQKEFEIW 649
Query 61 APSLKVMLFKGARLERRQLQRQLKQIDFNVCLTTFDLAIRERSALATPSWRHLVVDEGHR 120
+P LK++ FKG+R ERR L +++Q FNVCLTTFD IRE AL + W+H++VDEGHR
Sbjct 650 SPELKILCFKGSRYERRSLIYEMRQTKFNVCLTTFDFIIRESGALQSMQWKHIIVDEGHR 709
Query 121 MKNSKSKFHLSVSSFSASHRLLLTG 145
+KNSKSKFH+ ++ F + +RLLLTG
Sbjct 710 LKNSKSKFHVVLADFKSENRLLLTG 734
Lambda K H
0.322 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22480264135
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40