bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1707_orf3 Length=287 Score E Sequences producing significant alignments: (Bits) Value 8090.ENSORLP00000003131 87.0 7e-16 > 8090.ENSORLP00000003131 Length=588 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 10/89 (11%) Query 199 EFARRAVLLWAKLGRKTRRTVKTGSPIGSEASDNKIVSSSVHVPWGFIVPGGRFREMYYW 258 E+A + LW LGRK R VK D+ + S ++ P +VPGGRFRE+YYW Sbjct 127 EWAGQIHNLWNSLGRKIRSDVK----------DHPELYSLIYTPHPVVVPGGRFRELYYW 176 Query 259 DSYWIVRGLLHSGMISTARGIILNFADLV 287 DSYW++ GLL SGM STARG+I NF LV Sbjct 177 DSYWVINGLLVSGMTSTARGMIQNFLYLV 205 Lambda K H 0.320 0.136 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 96012411040 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40