bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_1705_orf4
Length=394
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFF1365c                                                       96.7    1e-18


> 5833.PFF1365c
Length=10287

 Score = 96.7 bits (239),  Expect = 1e-18, Method: Composition-based stats.
 Identities = 46/109 (42%), Positives = 74/109 (67%), Gaps = 4/109 (3%)

Query  11    RRSYSSSKMMVQVGPSDLPIEMSAYLFLRPLLTNLTSSTLWRNIIEKLGYSGREQP--SL  68
             +  Y+S+KM++ +G SDLPI++S+YLF++ LL + T   LW+  ++ +  S  E+   +L
Sbjct  9534  KNMYTSNKMVLAMGSSDLPIQLSSYLFIKKLLKHDTCLKLWKECLKYITSSSSEKSNLTL  9593

Query  69    KLDRGQAATAKVLAHTLWYQATVQLLSAAASPCKLRARPGERPCQNIFI  117
             ++DRG AATAK +AHT+WYQ+T  LL+      KLR +P +RP   +F+
Sbjct  9594  RIDRGMAATAKHIAHTMWYQSTYSLLNIDTD--KLRGKPRDRPFMVVFV  9640



Lambda     K      H
   0.318    0.132    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 156453723624


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40