bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1702_orf2 Length=229 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE1215c 367 2e-100 > 5833.PFE1215c Length=365 Score = 367 bits (941), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 164/229 (71%), Positives = 203/229 (88%), Gaps = 0/229 (0%) Query 1 ARTCSLILIVLDVLKPLTHKRIIEKELEGFGIRLNKKPPNISLVKKDKGGISVSHSVPLT 60 A++CSLILIVLDVLKPLT+K+IIEKELEGFGIRLNKKPPNI KKDKGGI+++H+VPL Sbjct 137 AKSCSLILIVLDVLKPLTYKKIIEKELEGFGIRLNKKPPNIIFQKKDKGGINITHTVPLN 196 Query 61 QLDEDTIRLICQEYRILNAQVSVRCDATADELIDVIEGNRLYVPCVYAVNKIDQVTLEEL 120 LDED I+ IC EYRI+NA +S+RC+AT D++IDVIEGNRLYVPC+Y +NK+DQ+T+EEL Sbjct 197 NLDEDMIKSICHEYRIINANISIRCEATVDDIIDVIEGNRLYVPCIYVLNKVDQITMEEL 256 Query 121 DILEQVPHYVPISAHLELNLDGLLEKIWEYLSLIRVYTKPRGQIPDYSSPVVLSSSSSKV 180 +++ ++PH VPISAHLE NLDGLLE IW YL L+R+YTKP+GQIPDY SPV+L KV Sbjct 257 NLVTKLPHNVPISAHLEWNLDGLLEAIWNYLDLVRIYTKPKGQIPDYESPVILKKEKCKV 316 Query 181 EDFCCRIHKSLLEEFKYAVVWGKSVKHNPQKVGKDHQLQDEDVVQIIKK 229 E+FC +IH+SL+++ KYA+VWGKSVKHNPQKVGKDH+L DEDVVQ++KK Sbjct 317 ENFCKKIHRSLVQQLKYALVWGKSVKHNPQKVGKDHELNDEDVVQLVKK 365 Lambda K H 0.319 0.138 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 63790376685 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40