bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1702_orf2
Length=229
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE1215c 367 2e-100
> 5833.PFE1215c
Length=365
Score = 367 bits (941), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 164/229 (71%), Positives = 203/229 (88%), Gaps = 0/229 (0%)
Query 1 ARTCSLILIVLDVLKPLTHKRIIEKELEGFGIRLNKKPPNISLVKKDKGGISVSHSVPLT 60
A++CSLILIVLDVLKPLT+K+IIEKELEGFGIRLNKKPPNI KKDKGGI+++H+VPL
Sbjct 137 AKSCSLILIVLDVLKPLTYKKIIEKELEGFGIRLNKKPPNIIFQKKDKGGINITHTVPLN 196
Query 61 QLDEDTIRLICQEYRILNAQVSVRCDATADELIDVIEGNRLYVPCVYAVNKIDQVTLEEL 120
LDED I+ IC EYRI+NA +S+RC+AT D++IDVIEGNRLYVPC+Y +NK+DQ+T+EEL
Sbjct 197 NLDEDMIKSICHEYRIINANISIRCEATVDDIIDVIEGNRLYVPCIYVLNKVDQITMEEL 256
Query 121 DILEQVPHYVPISAHLELNLDGLLEKIWEYLSLIRVYTKPRGQIPDYSSPVVLSSSSSKV 180
+++ ++PH VPISAHLE NLDGLLE IW YL L+R+YTKP+GQIPDY SPV+L KV
Sbjct 257 NLVTKLPHNVPISAHLEWNLDGLLEAIWNYLDLVRIYTKPKGQIPDYESPVILKKEKCKV 316
Query 181 EDFCCRIHKSLLEEFKYAVVWGKSVKHNPQKVGKDHQLQDEDVVQIIKK 229
E+FC +IH+SL+++ KYA+VWGKSVKHNPQKVGKDH+L DEDVVQ++KK
Sbjct 317 ENFCKKIHRSLVQQLKYALVWGKSVKHNPQKVGKDHELNDEDVVQLVKK 365
Lambda K H
0.319 0.138 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 63790376685
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40