bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1677_orf3 Length=734 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000009750 133 3e-29 > 69293.ENSGACP00000009750 Length=5541 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 116/369 (31%), Positives = 150/369 (40%), Gaps = 42/369 (11%) Query 265 SEWSEYGPCVGECGKEGVQTSTRVEISPQKPGSPPCPTCEAPRGRSCAEQPPGLTRTQPC 324 SEWS++GPC CG G Q R + P P P CAE T T C Sbjct 4437 SEWSKWGPCSVSCGF-GSQKRLR-------QCNNPLPANGGPH---CAELD---TETHGC 4482 Query 325 TMPVCKTDAHCGEFGAWSEWSTTCGTATRKRQREGYNSPPAAGGGLSCMEQNPPKHEFEV 384 C D + E+ W E S TCG R R R N PPA GG C + EV Sbjct 4483 QGKPCPVDGNWSEWSLWEECSRTCGQGNRTRVRTCSN-PPAQHGGKPCEGR-----AVEV 4536 Query 385 ETVQKSPCPVQQQPGPWSEWTECSATCGGGTKHREREGLPQEGELYGGQTLEQQGIAVRE 444 PCPV G W W+ CS TCG G + R R G Q + Sbjct 4537 IMCSVRPCPVAGNWGSWLPWSPCSETCGKGVQSRLRLCNSPPPAFDGPQCESTD----TQ 4592 Query 445 TASCSENPCPIDATCGEWTEYSACSRTCGGGTQERKREPWLDNAQHGGRTCMEQYPDGPI 504 T C E PCP+D W + ACS +CGGGT++R R QHGGR+C + Sbjct 4593 TQVCKERPCPVDGKWSSWVSWGACSVSCGGGTRQRTRLCASPAPQHGGRSC----EGNDV 4648 Query 505 SVRECNTQPCPVDEVVGDWEDWGQCSEQCGGGKRTRNRGPSKQEAMFGGKTVAQQNAELP 564 + CN+ CP+ G W WG CS+ C GG+ R R GG+ A + + Sbjct 4649 LIDFCNSDLCPISGNWGAWSSWGSCSKTCNGGQMRRYRTCDHPRPANGGRACAGADTQ-- 4706 Query 565 EGEKIEVVQEEGCNEVPCGPCTLPFSEWTECESC--SGHRTRE---SAVAFDYTDRMCSG 619 +Q + P + +W EC S G RTR ++ + R C G Sbjct 4707 -------IQRCSTPDCPVNGNWGSWQQWAECSSSCGGGERTRVRLCNSPSPSNVGRPCPG 4759 Query 620 DTHEVQSCE 628 D+ ++ C Sbjct 4760 DSSQLARCN 4768 Lambda K H 0.313 0.130 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 345481394830 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40