bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1653_orf1 Length=201 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_300 233 4e-60 > 5807.cgd8_300 Length=344 Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 113/206 (54%), Positives = 151/206 (73%), Gaps = 6/206 (2%) Query 1 EVLAHRLGLIPFKVNPKKLKFRNPNQELSEENSLKFKMHVKCSPGDLKPHQK---SMPVY 57 EVLAHRLGLIP ++P ++FRN +++L+E+NS+ FK++VKC+ D+ H+K S +Y Sbjct 110 EVLAHRLGLIPMLIDPNTIEFRNEDEDLNEKNSVCFKLNVKCTKDDIN-HEKGITSKAIY 168 Query 58 ARDLKWIPMSERQKQKFAQDPPAPVHPDILITKLRPGQEIELFGFLEKGLGKTHAKWSPV 117 ++DL WIP+S+ Q++KF + PP V DILITKLRPGQ IE + EK +G+ HAKWSPV Sbjct 169 SKDLVWIPLSDNQRKKFGKTPPKVVTDDILITKLRPGQSIEAILYCEKNIGRVHAKWSPV 228 Query 118 ATAVYRLEPEFVF-TSPIEGEEAKELKE-LCPMGVFDIEDSTGRAYAKFPRNCTTCRACL 175 TA YRL PEF F PI G +A +L++ +CPM VFDIED TG A PRNCTTCRAC+ Sbjct 229 CTASYRLLPEFGFPNGPISGSDALKLRDTVCPMKVFDIEDVTGNAVPTNPRNCTTCRACI 288 Query 176 ERFENQLQLNKIPDQFIFSIESTGSV 201 E+F N+++L K FIFSIE+TG + Sbjct 289 EKFPNKIKLLKDKFHFIFSIETTGCI 314 Lambda K H 0.319 0.137 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 48387021971 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40