bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1623_orf1
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd8_3080 275 7e-73
> 5807.cgd8_3080
Length=1371
Score = 275 bits (703), Expect = 7e-73, Method: Composition-based stats.
Identities = 117/191 (61%), Positives = 156/191 (81%), Gaps = 0/191 (0%)
Query 19 LIRARLREYQAEGVDWLFRLHRAGANCILADEMGLGKTIQTIALLAKMALEMGIWGPHLV 78
L++ +REYQ G++W+ +L++ G N ILADEMGLGKTIQTI+LLA +A M WGPHL+
Sbjct 333 LLKNNMREYQVAGLEWMVKLYKKGLNGILADEMGLGKTIQTISLLAYLACYMKNWGPHLI 392
Query 79 VVPTSVLENWEMEFKKFLPGFRVLLYYGSAAERQRKRQGWTRRHAFNVCIVSYATAVKDA 138
VVPTSV+ NWEMEFK++LP F+V+ Y+G+ ERQ+KR GW +AFNVCI SY ++DA
Sbjct 393 VVPTSVMLNWEMEFKRWLPCFKVITYFGTPKERQKKRIGWNDPNAFNVCIASYTLILQDA 452
Query 139 AILKRREWYSMVLDEAQNIKNFSSKRWQTLLTFNSQHRLLLTGTPLQNHLLELWSLMHFL 198
I KR++W ++LDEAQNIKNF S++WQ +L+FN++ RLLLTGTPLQN+L+ELWSL+HFL
Sbjct 453 HIFKRKQWQYLILDEAQNIKNFKSQKWQVMLSFNTERRLLLTGTPLQNNLMELWSLLHFL 512
Query 199 MPTLFSSHENF 209
MP +F+SH +F
Sbjct 513 MPHIFTSHHDF 523
Lambda K H
0.325 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 53286973563
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40