bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1535_orf3 Length=498 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0172 448 2e-124 > 5833.PF11_0172 Length=455 Score = 448 bits (1153), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 224/443 (50%), Positives = 306/443 (69%), Gaps = 5/443 (1%) Query 46 VQAAAGTGETSDGLLPHLADTHFWKRLSFTQFVIYLVGFSEGLTHLAALAIYYMLKDDLG 105 V+ GE LP L++ K FTQ V+YLVG S+GLTHLA+LAIYY+ KD Sbjct 16 VERTKSNGEG----LPLLSEKT-KKGFDFTQIVVYLVGLSDGLTHLASLAIYYLFKDYFR 70 Query 106 LSPAEVSALFIAPALPWVFKPVFAFISDSYPLRGGRRKPYMIAFSLLEGLGFIMLGTFPT 165 L+P +VS + + P +P++ KPV A I+DS+ + G RRKPY+ FSL + L F+ L Sbjct 71 LTPYQVSLILMYPYIPFILKPVIALITDSFSIFGMRRKPYLFLFSLFQSLNFLALAFLNL 130 Query 166 HILTALLSLFLISISASFCSAVAEALVVETTAGRSMDQSAENVSDFITAKAVGSLIVAYL 225 ++ A L LF IS+ ASFC+ VAEALVVE++ G++ Q V++FI +KA+GSL VAY Sbjct 131 SVIQASLILFFISLCASFCTTVAEALVVESSMGQTYSQGTNKVTEFIASKAIGSLSVAYF 190 Query 226 SGYLLEKTSKQSIFLATSIFPLFIAFITLFMEDVGGAPSYDMKTQLRLLMEFLKQSVIWG 285 SGY LEK ++ IF+ATSIFPL I+ LF+++ + + ++ QL L++F+ + G Sbjct 191 SGYFLEKMPREYIFIATSIFPLIISLSCLFLKEKEYSTNRNIFNQLSDLIKFINTPIFLG 250 Query 286 PALYIFAYMAGPDYDDALFFYFTNKLGFSPTFMGTLRFTYGIAALVGVVMYRTFFKRTGF 345 P LYIF YM+GPDYDDA FF+ TNKLGF P+FMGTLR TYGIA+L+G+++YR F K Sbjct 251 PFLYIFVYMSGPDYDDAFFFFCTNKLGFRPSFMGTLRLTYGIASLIGIIIYRVFLKNCSL 310 Query 346 RKTLLATILVAVPIYLSPIILTTGFNRTLGISNKAFVLSGGFLIEATAEIQLLPLLVLTA 405 RKTL+ T LV+ PIY+SPIILT N+ LGISN+ FVLSGGFLIEA EIQLLPL +LTA Sbjct 311 RKTLIITTLVSFPIYISPIILTEHINKFLGISNELFVLSGGFLIEAITEIQLLPLFILTA 370 Query 406 SICPPGLEGSVYAMMMSVRNTGSMVSRGISAVLTYMAGITSSNFTHLTGYIMLCGASLLI 465 +IC PGLE SV+A ++SV+N GS+ +G S+ +TY+ I S NF +L+ YI+ CG LL Sbjct 371 NICQPGLEASVFATILSVKNLGSLTKKGTSSFITYLMKIDSYNFDNLSLYILTCGFFLLF 430 Query 466 PLIFLEYVPDDAEVQRVKQYHDS 488 L + +P++ ++++K S Sbjct 431 SLTLVPLLPNEEHIEKLKNKETS 453 Lambda K H 0.326 0.140 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 215083995174 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40