bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1465_orf2
Length=251
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0311 140 4e-32
> 5833.PF14_0311
Length=269
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 134/215 (62%), Gaps = 4/215 (1%)
Query 38 DDSRKRKQ---VDEQRYQEIRDSIVAVEKTLNQEIKRRVDANKALQQVSEQMANEMLDRL 94
D+ R +K+ ++ Y+E++ I+ +E+ +N E+K+R+DANK +Q + EQMAN M++ +
Sbjct 39 DEGRNKKKNSCSNDNFYEEMKYDILRIERNINSEVKKRLDANKNIQLLIEQMANNMINNV 98
Query 95 QLRIVKYIESLTVSMDMLITRCESLEKGLAQMKGELPSKLAQDFASLQREAAALRQAFTT 154
+I IES++ +D +I +CE LEK ++Q+K ++P+K+ D SL+RE A +
Sbjct 99 LNKITTKIESISSDLDKIIHKCEELEKVISQIKVDIPTKIQTDMISLKREIADFQLVINK 158
Query 155 ETRSKNERESIVCKKFGEMQLLVDSKFEAEIAVRQEQLNLIKREVEKLVKGDEAHE-QFH 213
+K +R++I+ K + + K ++EIA +Q L+ +K E ++L+ D + F
Sbjct 159 YLNNKKKRDNILYGKIENISAYLTGKIQSEIAFKQHDLSYLKNESDRLLNYDNDDDVNFK 218
Query 214 AFIMEELMALKNGLALATQAREQSDDEIIQAINVF 248
++E+ +K+ L L +AREQSDD+IIQA+N +
Sbjct 219 NVFLQEVEEIKDALNLTVKAREQSDDDIIQAMNKY 253
Lambda K H
0.317 0.130 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 76235559246
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40