bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1446_orf1 Length=372 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_5280 163 8e-39 > 5807.cgd8_5280 Length=283 Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 55/281 (19%) Query 1 AQAEDSGIPTVEDTLFRCMERACLIPNRHACNFSRCGRTDKGVHAAGNYVSLDMRVIQGA 60 A +D IPT+E +++ + + LI + +C+ RCGRTD+GVH+AGNY+S+++R Sbjct 8 AFQKDDKIPTIEGEIYKALLQLRLIKDIDSCDLVRCGRTDRGVHSAGNYISVNLRTRAKN 67 Query 61 AQQDSGGCTVYVPLLNRLLPPDIRVLAATQVPPTFDARFDCLFRVYKYFF--GTAGLDIS 118 + + Y+ +LN +LP DIRV+ +V P F ARFDC +R+YKYFF IS Sbjct 68 LEPYN-----YMEMLNGVLPWDIRVIGYCEVRPDFSARFDCEYRLYKYFFPLNHERTKIS 122 Query 119 R-----------MRAAAKQFLGMHNFLRFCKVDRK--QERSLWRRIIRFDLELQEDG--F 163 + M AAKQFLG H++ RFCK+D K + ++ R I FD+ ++ F Sbjct 123 KFPKIPPEQVPLMNVAAKQFLGTHDYRRFCKMDLKNRKNQTYIRTIYEFDINFVDENRTF 182 Query 164 GVATIVGVSFLWHQVRYMMAALMEVGRGAWPAACISTLLREGLEVEAAVEAAKLDAAEES 223 VATI G +FLWHQVR MM L E+G+ + I+ +L Sbjct 183 AVATIKGSAFLWHQVRLMMGILFEIGQQKFNPEVITQML--------------------- 221 Query 224 ASMTRAGSTEVEELRLATESCCTALHPAPASNLVLYDCCFE 264 T+VE+ +A S A LVL+DC F+ Sbjct 222 --------TDVEQKNIAELS----FQMATELGLVLWDCVFK 250 Lambda K H 0.323 0.135 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 143415913322 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40