bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1391_orf1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
5270.UM03299.1 272 8e-72
> 5270.UM03299.1
Length=248
Score = 272 bits (695), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/250 (54%), Positives = 181/250 (72%), Gaps = 3/250 (1%)
Query 25 MPRTPWIGGNWKSNGTVASITELSKELNHAEFDPSQTEVVVFPTALHIGLAKEKLK-NGF 83
M RT ++GGNWK NG++ S +L++ L A+ D S EVVV P ALH+ +E+LK +
Sbjct 1 MARTFFVGGNWKMNGSLESTKQLTQTLTQAKLD-SNVEVVVSPPALHLLAVQEQLKGSKV 59
Query 84 QIGCQNISKTGPGAFTGEITAGMVKDFGLKWVMVGHSERRQYYSETDSVVAEKVAMAMKE 143
+ QN GAFTGE++ M+KD G+ WV++GHSERR + E+D+ VAEK A A+ E
Sbjct 60 AVAAQNAYHKPSGAFTGEVSVTMLKDAGIPWVILGHSERRTLFHESDANVAEKTAAALAE 119
Query 144 EGIHVTICIGEKLEEREANKTMEVCRQQLEAVLPKVSDWRRVVIAYEPVWAIGTGKVATP 203
+ V +CIGE LE+REAN+T+ V +QL+AV V DW ++V+AYEPVWAIGTGKVAT
Sbjct 120 -NLSVILCIGETLEQREANETVNVVVRQLDAVADHVKDWSKIVVAYEPVWAIGTGKVATS 178
Query 204 EQAQEVHAALRKFVAEKAGEAVAEELRIVYGGSVSEQNCEALLRCTDVDGFLVGGASLKK 263
EQAQEVHAA+RK+ EK G+ A++LRI+YGGSV+ +NC+ L + D+DGFLVGGASLK
Sbjct 179 EQAQEVHAAIRKWATEKLGKDTADQLRIIYGGSVAAKNCKELAQRPDIDGFLVGGASLKP 238
Query 264 AFVDIIGAPA 273
FVDI+ A A
Sbjct 239 EFVDIVNANA 248
Lambda K H
0.317 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 89781565905
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40