bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1353_orf1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
10116.ENSRNOP00000047281 142 4e-33
> 10116.ENSRNOP00000047281
Length=180
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Query 24 MQIFVRSYAGESLPVEVSATSTVLELKQHLEARLGVAASLQRLFFGVSAVDDACTLEEAG 83
M+IFV + G+++ ++ + T +K ++ + G+ QRL F +D CTL +
Sbjct 26 MKIFVTTLTGKTITLQFEPSGTTENVKAKIQDKEGIPPEEQRLVFAGEQREDGCTLSDYN 85
Query 84 VEEEATLFQSLELLGAGKKRKRKTYTKPKKQKHKNKKVKLAVLKFYKVDDNNKVTRLRKE 143
+++EATL L L G K+RK K+Y PKK+KHK KVKLAVLK+YKVD+N K++RLR+E
Sbjct 86 IQKEATLHLGLRLHGGAKERK-KSYPTPKKRKHKRTKVKLAVLKYYKVDENGKISRLRRE 144
Query 144 CPSKTCGSGVFMAQHENRNYCGRCGVTYILNAGGDQ 179
CPS G+GV M H +R+YCG+C +TY N D+
Sbjct 145 CPSDEGGAGVVMGSHFDRHYCGKCCLTYCFNKPEDK 180
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 36430169559
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40