bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1284_orf1
Length=316
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0233 436 5e-121
> 5833.PF13_0233
Length=818
Score = 436 bits (1121), Expect = 5e-121, Method: Compositional matrix adjust.
Identities = 202/316 (63%), Positives = 260/316 (82%), Gaps = 0/316 (0%)
Query 1 RNFLGMLDIFGFEVFKNNSLEQFFINVTNEMLQKNFVDIVFTREAKLYKEEGVSTAELVY 60
+ F+GMLDIFGFEVFKNNSLEQ FIN+TNEMLQKNFVDIVF RE+KLYK+EG+STAEL Y
Sbjct 462 KTFMGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTAELKY 521
Query 61 TSNADVISLLTDKKSSILSTLEDQCLAPGGGDEKFVAACKSAFKNSPKFKPAKVSPNINF 120
TSN +VI++L +K S+LS LEDQCLAPGG DEKFV++C + K + KF PAKV+ N NF
Sbjct 522 TSNKEVINVLCEKGKSVLSYLEDQCLAPGGTDEKFVSSCATNLKENNKFTPAKVASNKNF 581
Query 121 LVCHTIGDIQYNAEGFLFKNKDVLRAEIMEVVQASPNPVVRDLFAGIVMEKGKIAKGQLI 180
++ HTIG IQY AE FL KNKDVLR +++EV++ SPNP+V+ LF G V+EKGKIAKG LI
Sbjct 582 IIQHTIGPIQYCAESFLLKNKDVLRGDLVEVIKDSPNPIVQQLFEGQVIEKGKIAKGSLI 641
Query 181 GSQFLRQLEALMDLINSTEPHFVRCVKPNDTKKPLDWVQSKVLIQLHALSVLEALQLRQV 240
GSQFL QL +LM+LINSTEPHF+RC+KPN+ KKPL+W + K+LIQLHALS+LEAL LRQ+
Sbjct 642 GSQFLNQLTSLMNLINSTEPHFIRCIKPNENKKPLEWCEPKILIQLHALSILEALVLRQL 701
Query 241 GFSYRRPFKDFLYQFKFIDLGICENPNLSPKEACEALLEKAKVSKSGCQVGKTMIFLKQD 300
G+SYRR F++FLYQ+KF+D+ E+ ++ + C +L+ + +S+S ++GK+M+FLKQ+
Sbjct 702 GYSYRRTFEEFLYQYKFVDIAAAEDSSVENQNKCVNILKLSGLSESMYKIGKSMVFLKQE 761
Query 301 AAKQLTLLQRQCLAAW 316
AK LT +QR+ L W
Sbjct 762 GAKILTKIQREKLVEW 777
Lambda K H
0.322 0.137 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 112347727084
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40