bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1212_orf1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0272 153 6e-36
> 5833.PF13_0272
Length=208
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 6/189 (3%)
Query 62 NVQVLTDATFEQETQAVTGSTSGDWFVKFYAPWCVHCRKLAPVWEELATKLKGQINVAHL 121
+V L D+ FE TQ TG+T+G WF+KFYAPWC HC+ ++ W +LAT+LKG+INVA +
Sbjct 24 DVIELNDSNFESLTQLSTGNTTGSWFIKFYAPWCSHCKAMSKTWAQLATELKGKINVAKI 83
Query 122 DATTNQQTARRFGIRGFPTLLYFKDGQMYNYSGA-RTVDDLYTFATGGWKQTTGKPIPPV 180
D T N +T +RF I GFPTLLYFK+G+MY+Y R+++ F +K P
Sbjct 84 DVTLNSKTRKRFKIEGFPTLLYFKNGKMYDYKNHDRSLEAFKNFVLETYKNAKASEPPKP 143
Query 181 VSWFDLTKDEILVAFQQLRDVF-IQFPAPLLMLFAMGCIMGCVLTCLCVALCMGTKGREK 239
+++ D+ KD + FQ + ++ FP+ L +L ++ + G + + + + C G K
Sbjct 144 LNYMDILKDFLNETFQNIDRIYKYAFPS-LAVLVSVSFLTGSIFSLILLKCCCMKSGASK 202
Query 240 KVVVSKKKD 248
V+KKKD
Sbjct 203 ---VAKKKD 208
Lambda K H
0.325 0.136 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 74420426883
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40