bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1205_orf2
Length=384
Score E
Sequences producing significant alignments: (Bits) Value
9544.ENSMMUP00000032836 119 1e-25
> 9544.ENSMMUP00000032836
Length=1917
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 5/200 (2%)
Query 183 AQAIPFEITKVLKEYRTVFPDNLPKGLPSTRAHDHHILLVPGKLPAKYTIHRMTPDQLTF 242
A++IP +T +L+EY VFP + GLP R +H I L+PG +R ++
Sbjct 126 ARSIPPVVTNLLQEYEDVFPAEISPGLPPMRGIEHQIDLIPGASLPNRAAYRTNLEETKE 185
Query 243 HKQKTAKLSDNSWIGPIYSPVCSSTIMVDKRDDGLGERKMRMLVNYQALNAPTVAPDFTL 302
+++ L D+ ++ SP I+V K+D RM V+ +A+N T+ +
Sbjct 186 IQRQVQDLLDSGYVRQSLSPCVVPVILVPKKDGS-----WRMCVDCRAINNITIRYCHPI 240
Query 303 LPIQTILEMLGGSKYLCTLDLEAGLHQTRMAKEDRWKTAFRPLLGLLEYRVMPFGLKGAP 362
+ +L+ L GS +DL +G HQ RM D WKTAF+ GL E+ VMPFGL AP
Sbjct 241 PRLDDMLDELCGSIIFTKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 300
Query 363 ATFQASINAYLQPLFGQVLL 382
+TF +N L+P G+ ++
Sbjct 301 STFMRLMNEVLRPFIGRFVV 320
Lambda K H
0.320 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 150527446214
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40