bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1197_orf3 Length=176 Score E Sequences producing significant alignments: (Bits) Value 7719.ENSCINP00000005737 142 4e-33 > 7719.ENSCINP00000005737 Length=625 Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 5/176 (2%) Query 3 ETCKWNGWGYCDTYVSMSSASMIRLHGSRYSLCGVDMGHWHEFMESIPGIEFAFSSPA-- 60 E KW GWGY D+ ++ I GSRY L G+ M +MES GI S A Sbjct 54 ELLKWGGWGYNDSMFKLNEKGSICFTGSRYKLSGLVMPELRPWMESTIGIHVKQRSEAVA 113 Query 61 QDTLVIPPQRVNNEAFIKELQQLAPEIEVANSEKERLFHGHGHTCNEIFELRYGTV-ARL 119 + L P+ + NE F+K++ Q +EV++ +RL HGHT E+F LR G AR+ Sbjct 114 EIDLSKMPKPILNEGFMKDVHQTG--MEVSSDSMDRLVRSHGHTLEELFLLRKGEFNARV 171 Query 120 PDVVLYPKEHKDVEAIVECASRHNVCLIPFGGGTSVTLGVAVPVSESRMVATVSLA 175 PD++++P+ H DV +V A RHNVCLIP GGGT+VTL +A P +ESR +ATV + Sbjct 172 PDLIVFPRNHDDVVKLVSAAVRHNVCLIPIGGGTTVTLALACPENESRCIATVDMT 227 Lambda K H 0.320 0.135 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 35336795289 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40