bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1182_orf2
Length=448
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT1G02520.1 235 2e-60
> 3702.AT1G02520.1
Length=1278
Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 248/462 (53%), Gaps = 45/462 (9%)
Query 9 KNIELGSPDPVTMEQVIAAAKEANADGFITRFPEGYETDCGAYGGQLSGGQKQRIAIARA 68
+NI G + T+E++ AA + ANA FI + P+G +T G +G QLSGGQKQRIAIARA
Sbjct 475 ENIAYGKENA-TVEEIKAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARA 533
Query 69 LIRRPNILIFDEATSALDTQSERVVQEALDALVQTSKATTLIVAHRLSTIQNADLIIVLE 128
+++ P IL+ DEATSALD +SERVVQEALD ++ TT+IVAHRLST++NAD+I V+
Sbjct 534 ILKDPRILLLDEATSALDAESERVVQEALDRVMVNR--TTVIVAHRLSTVRNADMIAVIH 591
Query 129 PSPQGATVAQQGTHHELMKDTSGLYYHLVSSQIVPTVEETEDDTKPQQVK-----REESE 183
+G V ++G+H EL+KD+ G Y L+ ++E D K ++ R +
Sbjct 592 ---RGKMV-EKGSHSELLKDSEGAYSQLIR------LQEINKDVKTSELSSGSSFRNSNL 641
Query 184 VDDIEAAAP--NQTWRESMK--------HVGGSIARASRSLTHS------PNFRTYRIIL 227
+E + N + S+ +G RA + T + P RI
Sbjct 642 KKSMEGTSSVGNSSRHHSLNVLGLTTGLDLGSHSQRAGQDETGTASQEPLPKVSLTRIAA 701
Query 228 KH---WAVVLLTLIAAACAGVIFPVFGYSFAHFISTYFSPDPQAIRDGVAKWALILVGLG 284
+ V+LL +AAA G IFP+FG + I +F P + RD WA+I V LG
Sbjct 702 LNKPEIPVLLLGTVAAAINGAIFPLFGILISRVIEAFFKPAHELKRDS-RFWAIIFVALG 760
Query 285 FAQGIVDAIKIFGIDFCGYKVATALRERAFHQTVHQDIAFFDLTENNAGKLCSILSADVL 344
IV +++ G K+ +R F + VH ++A+FD +N++G + + LSAD
Sbjct 761 VTSLIVSPTQMYLFAVAGGKLIRRIRSMCFEKAVHMEVAWFDEPQNSSGTMGARLSADAT 820
Query 345 DVKVGCTGNVVSV-VQVFASFATGLIIAFCGEWRLALVILAFCVLLVPANVIEAK-MGNP 402
++ G+ +S+ VQ AS A+GLIIAF W LAL+IL L+ ++ K M
Sbjct 821 LIR-ALVGDALSLAVQNVASAASGLIIAFTASWELALIILVMLPLIGINGFVQVKFMKGF 879
Query 403 APTHKVRHGDEVKGAPMIMNQATSGIRVVSAFGLEEVFIKSY 444
+ K ++ + A + N A IR V++F EE ++ Y
Sbjct 880 SADAKSKYEE----ASQVANDAVGSIRTVASFCAEEKVMQMY 917
Lambda K H
0.321 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 187075795405
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40