bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1118_orf2 Length=553 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0242 657 0.0 > 5833.PF13_0242 Length=468 Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust. Identities = 308/447 (68%), Positives = 369/447 (82%), Gaps = 1/447 (0%) Query 97 SVPAFDIEGKIKVENPVVELDGDEMTRILWAWIKEKLILPYLDVNLKYFDLSLPNRDATD 156 S AF+I GKI VENP+VELDGDEMTRI+W IKEKLILPY+++ +KYFDLS+ NRD T+ Sbjct 23 SKAAFNICGKINVENPIVELDGDEMTRIIWKDIKEKLILPYVNLKIKYFDLSIENRDKTN 82 Query 157 DQITLDAAEAIKKYNVGIKCATITPDAARVKEFGLKQMWKSPNGTIRNILDGTVFRAPIL 216 DQ+T++AAE IKK +VGIKCATITPDAARVKEF LK+MWKSPNGTIRNILDGTVFR PIL Sbjct 83 DQVTIEAAEEIKKTSVGIKCATITPDAARVKEFNLKEMWKSPNGTIRNILDGTVFRTPIL 142 Query 217 ISNVPRLVPGWRKPIVIGRHAYGDQYKSKALLCEGPGLFEMVFTPADSSKPPQREAVLKF 276 I N+P+LVP W+KPIVIGRHAY DQYK K+L E G FE+VFTP D+S+ RE V F Sbjct 143 IKNIPKLVPNWKKPIVIGRHAYADQYKQKSLKIEKSGKFEIVFTPDDNSQV-LRETVFHF 201 Query 277 EGPGLMLSMYNTVQSIRGFALSSFNFALSQKMPLYLSTKNTILKEYDGVFKDIFEEIYLT 336 + PG+ L MYNT +SIR FALS F +AL KMP+Y+STK+TILK YDG+FKDIF+EIY Sbjct 202 KSPGVCLGMYNTEESIRNFALSCFQYALDLKMPVYMSTKSTILKIYDGLFKDIFDEIYEK 261 Query 337 QFKSKFEQNNIFYEHRLIDDMVAQALKSEGGFVWACKNYDGDVQSDIVAQGYGSLGLMTS 396 QFK FEQ+N++YEH+LIDDMVAQ LKSEGGF+WACKNYDGD+QSD VAQGYGSLGLM+S Sbjct 262 QFKKSFEQHNLWYEHKLIDDMVAQVLKSEGGFLWACKNYDGDIQSDAVAQGYGSLGLMSS 321 Query 397 VLVCPDGKTEVSEAAHGTVTRHYRQHQQGQKTSTNPIASIFAWSRGLTHRAKLDKNSRLQ 456 VL+CPDG T VSEAAHGTVTRHYR +Q+G+KTSTNPIASIFAW++GL HRAKLDKN L+ Sbjct 322 VLLCPDGVTCVSEAAHGTVTRHYRAYQKGEKTSTNPIASIFAWTKGLEHRAKLDKNDNLK 381 Query 457 QFCLALERACVQTVEAGLMPKDLAICVKGAENVKPSDYLITEDFIDAIADTLKMNLITHQ 516 QFC ALE+AC++TVE GLM KDLA C+KG +NV DY+ T+D I+AI + LK+ ++ +Q Sbjct 382 QFCYALEKACIETVEDGLMSKDLAGCIKGIKNVTEKDYIFTQDLINAINEKLKLKILQNQ 441 Query 517 LPIHHSNNKHKLSNPNWDHYAPSEHNS 543 +KL N NW+ YAP EH++ Sbjct 442 SKNDPQATSYKLKNDNWNFYAPQEHST 468 Lambda K H 0.318 0.134 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 245774723460 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40