bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1113_orf1
Length=118
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd5_120 94.0 1e-18
> 5807.cgd5_120
Length=343
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 0/85 (0%)
Query 5 FAGNSWLVHRHEEPYWQCFSPDEIVVLSPDASEELLDVDPSKVFVIGGLVDRTISKGLSF 64
++ N W + HE+P+W+ F +IVVLSPD+SEEL + +P KV++IGGLVDRT++K S
Sbjct 206 YSMNKWFMKLHEKPFWEVFPLSQIVVLSPDSSEELEEFEPDKVYIIGGLVDRTVTKYESL 265
Query 65 SQAEELGLTCRKLPFKKLGRSSRGC 89
+QA E C+KLP K L C
Sbjct 266 NQALEKKCVCKKLPVKSLISGRANC 290
Lambda K H
0.315 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22460540320
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40