bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1106_orf1 Length=132 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0086 130 1e-29 > 5833.PF11_0086 Length=3334 Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 58/121 (47%), Positives = 87/121 (71%), Gaps = 0/121 (0%) Query 4 KEDAQMVLLRHLKGLLNKLTIERFDRIYQQILNAGIKQEKEVKALMQMIFDKAVSQHHFI 63 K D ++R L+G+LNKLT E+FD +Y+QI+ GI + E+ LM+++F+KAV+QHHF+ Sbjct 2681 KADKYTCMMRKLRGILNKLTFEKFDLLYEQIILVGITKLDEIIGLMKLVFEKAVTQHHFV 2740 Query 64 QMYVMLCGKLKTDFQELLQDDHRSTKFRRILIDQCEDSFNANLEPIAVPQGLSEDDAYEF 123 QMYV LC KL F + +D + +F++ILI+QC+DSF NL+PI P L+E++ +EF Sbjct 2741 QMYVQLCKKLNVHFHNMKLEDDTTVQFKKILINQCQDSFENNLKPIEFPSHLNEEEKFEF 2800 Query 124 E 124 E Sbjct 2801 E 2801 Lambda K H 0.322 0.137 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22851147482 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40