bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1081_orf1 Length=336 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_3850 418 1e-115 > 5807.cgd3_3850 Length=520 Score = 418 bits (1075), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 192/258 (74%), Positives = 228/258 (88%), Gaps = 0/258 (0%) Query 9 ASMQALETLTGALFQRPPVISAVKRQLRIRTIYESEILSYDEDKHLCVFRVSCEAGTYIR 68 A + LETLTGALFQRPPVISAVKRQLR+R+IY+S++L YDE ++L VF CEAGTYIR Sbjct 151 AVSRCLETLTGALFQRPPVISAVKRQLRVRSIYDSKLLDYDEKRNLAVFWAKCEAGTYIR 210 Query 69 TLCVHLGLLLGTGAHMQELRRVRSGNLQEDGNLVTLHDVLDAMFVYDAFRDETYLRRIIF 128 T+CVH+GLLLG GAHMQELRRVRSG L E+ N+VT+HD+LDA ++ D +RDE+YLRRII Sbjct 211 TMCVHMGLLLGVGAHMQELRRVRSGCLSENDNMVTMHDILDAQYMLDNYRDESYLRRIIS 270 Query 129 PLEMLLVGLPRIVVKDSCVNAICYGAKLMIPGVLRFENNIEVNAEVVLMTTKGEAIALGI 188 PLE+LL LPRIVVKDSCVNAICYGAKLMIPGVLRF+N I+V EVV+MTTKGEAIA+G+ Sbjct 271 PLELLLTDLPRIVVKDSCVNAICYGAKLMIPGVLRFDNGIDVGTEVVMMTTKGEAIAIGV 330 Query 189 AQMSTPVIASVDHGIVAAVKRVLMDRDTYAMRWGYGPRASEKKKMILGGLLDKKGRPNEN 248 AQM+T VIASVDHG+VA +KRV+M+RDTY MRWG+GPRASEKKK+ILGG LDK G+PNE Sbjct 331 AQMTTAVIASVDHGVVAIIKRVIMERDTYDMRWGHGPRASEKKKLILGGKLDKHGKPNEQ 390 Query 249 TPKEWLKTEGFLPKLTGE 266 TP+ WLK EG++PKLTG+ Sbjct 391 TPESWLKYEGYIPKLTGD 408 Lambda K H 0.317 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 124299612944 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40