bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1079_orf2
Length=284
Score E
Sequences producing significant alignments: (Bits) Value
43179.ENSSTOP00000012047 144 3e-33
> 43179.ENSSTOP00000012047
Length=676
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 113/210 (53%), Gaps = 7/210 (3%)
Query 61 AASPNESDAGPSSNADCDMNSPKDTDSKFPDSNKEEVVRLINCSHHFHTECIRMYVQSCT 120
AASP D+ S + D N KD D+ ++ V L C H F CI +
Sbjct 473 AASPPFKDSASSVASKAD-NKEKDLCVICMDTMSDKQV-LPKCKHEFCRHCIDTAISYRP 530
Query 121 KGGFYCPTCNVLQLPGNGPCPPGKMKWRICNRPLLAGHPDEGTIIIDYIVSGGIQTERHA 180
CP C G P G M R + L G+P GTI+I Y + GGIQT +H
Sbjct 531 ----VCPVCQTSYGVQKGNQPEGTMNHRTVKQSL-PGYPSCGTIVITYNMLGGIQTNKHP 585
Query 181 RPSIPFTGARRQAYLPDCLMGRRLLRLLIQAFVKGHIFTVGDSVTSGQSNVVVWNGIHHK 240
P P+ +R AYLPD G+++L LL +AF + IFTVG S TSG SNV+ WN IHHK
Sbjct 586 NPGKPYHEIQRTAYLPDNKEGKKVLELLSKAFEQKLIFTVGQSRTSGISNVITWNDIHHK 645
Query 241 TSVSGGVLHYGYPDDTFLSRLAEELKARGF 270
TS SGG +YGYPD +L R+ EELKA+G
Sbjct 646 TSWSGGPENYGYPDPHYLERVKEELKAKGI 675
Lambda K H
0.317 0.133 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 94212178333
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40