bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1053_orf3 Length=252 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_880 376 3e-103 > 5807.cgd1_880 Length=405 Score = 376 bits (966), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 178/246 (72%), Positives = 213/246 (86%), Gaps = 0/246 (0%) Query 1 VVVGTPGRVNDMLEKRHLRCEQMQLFVLDEADEMLSRGFKAQILAVFQHLPQDVQVALFS 60 +VVGTPGRV DML+K +LR + ++LF+LDEADEMLSRGFK QI +F+ LPQDVQVALFS Sbjct 152 MVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFKKLPQDVQVALFS 211 Query 61 ATMPADILELTTQFMRKPKRILVKKDELTLEGIAQYFIDVQREENKFDTLVDLYETLTIT 120 ATMP +IL LTTQFMR PKRILVK++ELTLEGI Q+++ V+++E K DTL+DLYETLTI Sbjct 212 ATMPNEILHLTTQFMRDPKRILVKQEELTLEGIRQFYVGVEKDEWKMDTLIDLYETLTIV 271 Query 121 QAIIYCNTRRKVLQLVEMMTGHDFTVSAMHGDMEQQQRETVLREFRSGSTRVLITTDLLA 180 QAIIYCNTRR+V QL + M DFT S+MHGDM+Q+ RE ++R+FRSGS+RVLITTDLLA Sbjct 272 QAIIYCNTRRRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITTDLLA 331 Query 181 RGIDVQQVSLVINYDIPTSKENYIHRIGRSGRFGRKGIAINFVTAADMEQLKDIETHYNT 240 RGIDVQQVSLVINYD+P S E YIHRIGRSGRFG+KG++INFVT D+ L+DIE HYNT Sbjct 332 RGIDVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDDIVCLRDIERHYNT 391 Query 241 QIQEMP 246 QI+EMP Sbjct 392 QIEEMP 397 Lambda K H 0.322 0.136 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 76840603367 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40