bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1026_orf3
Length=335
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0019 434 3e-120
> 5833.PF08_0019
Length=323
Score = 434 bits (1115), Expect = 3e-120, Method: Compositional matrix adjust.
Identities = 204/314 (64%), Positives = 258/314 (82%), Gaps = 2/314 (0%)
Query 23 DSPLVFKGVLEG-HTDWVTAISTPT-VKSNTIISSSRDKKIIVWNLNDSPNAETVGFARR 80
++ + +GVLEG H+DWVT++STPT K TI+S+SRDKK+IVWN+N ++ +G A++
Sbjct 7 EAEISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKK 66
Query 81 ALTGHSQCVQDVVISSDSNFALSGSWDKTLRLWDLNVGETVRTFQKHTSDVNSVAFSADN 140
+LTGHSQ + DV ISSD FALSGSWD ++RLWDL++GET+R+F HTSDV SV+FS DN
Sbjct 67 SLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDN 126
Query 141 RQIVSGSRDRTVRLWNTLADCKYTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVW 200
RQIVS SRD+T++LWNTLA CKYTI + QHTDW++CVRFSPSP + +IVSCGWDKLVKVW
Sbjct 127 RQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Query 201 SLTTCKLTTNLVGHTSVLYTVTVSPDGSLCASGGKDGVAMLWDVSEGKHLYSLDASCTIN 260
+L C L NL GHT VL TVT+SPDGSLCASGGKDGVA LWDV EGKHLYSL+ TIN
Sbjct 187 NLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTIN 246
Query 261 SLCFSPCNYWLCAATDKSVKIWDLENKNVLDDIHPDQPVKSGIPWCTSLNWSYDGRTLFI 320
SLCFSPC+YWLCAATD+ ++IW+LE+K ++ +I+P + K G+PWCTSL WS +G+ L+
Sbjct 247 SLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYC 306
Query 321 GTTSGNIHVYEVAE 334
G+T GNI+VYEV +
Sbjct 307 GSTDGNIYVYEVKK 320
Lambda K H
0.318 0.131 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 123702018651
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40