bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1002_orf1
Length=300
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd5_1240 82.0 2e-14
> 5807.cgd5_1240
Length=750
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 28/200 (14%)
Query 54 SELLRYMDLCNCCDVLVCLFGGSCTYERSAFSRRGYKILQALKLQGLPPSVIGVGCVDPS 113
+++ +DL C D ++ LFG + ++ AF GYK+L+++KLQG ++
Sbjct 138 NKIFDTLDLIKCSDFVMALFGFNDEFQ--AFDEIGYKLLKSIKLQGQTDTI--------G 187
Query 114 VLEPADAPKGKSSASESLKFMRRFFESELGAERKFFSIGSDADWHNVLRAVGAAASLTQG 173
+ ++ + + K ++ FE E KFFS+ + D N+L ++
Sbjct 188 LFFHNESHNFGNKILDCEKVFKKSFEMEFEKNMKFFSLQKENDIRNLLSSIPNMGY---- 243
Query 174 DTNTKTVAKGAEAAASRRRGHLLALSWHIAWHHVSEDPAAQPEPCLEACGLVRGAGLTCN 233
++ RG++L+ S I ++ S + Q L G VRG GL+ N
Sbjct 244 ----------SKICLREGRGYMLSESSSIVVNNYSNEEKCQ----LVIRGFVRGVGLSMN 289
Query 234 LPVHITGVGDFVLSRIETME 253
PVHIT +GDFV+ I ++
Sbjct 290 FPVHITNIGDFVIDEIRPID 309
Lambda K H
0.320 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 103813419437
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40