bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1001_orf3
Length=654
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd3_2620 710 0.0
> 5807.cgd3_2620
Length=1902
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/691 (53%), Positives = 470/691 (68%), Gaps = 42/691 (6%)
Query 6 ELMQMDSEKIRRVYKHHFDQESYGKGWI-LDEELRTRLSVDFAAQQVLEDEFETIKEDKL 64
EL+QM++ + Y+H+ + +G W + L L D +Q +L E++ + D+
Sbjct 919 ELLQMEAAVFQHKYRHNLEHPRWGSSWAGVQPSLIKNLQFDLESQNILNSEYKQLVTDRE 978
Query 65 RLCKTIFPDGEVKQHIPINIMRLVEFAKAQFPASVEQL---RKQDPVAIAKSVQELLNEK 121
+L K IFPDGE +QH+PINI R+++ A+ +FP V + PV I K V+ LL++
Sbjct 979 QLGKDIFPDGETRQHLPININRIIQMAQQKFPQRVSDTSSSKDWGPVYIIKKVESLLDKL 1038
Query 122 L------VVVKQTCKA----DTISAEVQENATIFMKAHLRTVLNSRRLLEREQLGAKAVH 171
L ++ + K+ D+I AEVQ+NAT + H+R+ L S+++LE ++LG A
Sbjct 1039 LLWKNVGIINDEGNKSNFVFDSIIAEVQKNATTLLGIHIRSSLASKKILEVDRLGPTAFE 1098
Query 172 WLLGEVERQFHRSLAHAGECVGAIAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKE 231
W+LGE+E QF+RSLAH+GE VG IAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRL+E
Sbjct 1099 WILGEIEHQFYRSLAHSGEMVGTIAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLRE 1158
Query 232 LINVAKTVKTPSLTVYLLDEGAYDQERAKDVQTHLEHTTLEKVCTMAQVIYDPDPTKTIV 291
LINVAK V+TP+LTVYL A DQE+AKDV T LEHT L+ + T+A ++YDP+ KTIV
Sbjct 1159 LINVAKNVRTPTLTVYLESGIANDQEQAKDVLTLLEHTMLQNITTIAHILYDPEQDKTIV 1218
Query 292 PQDKQWVSDYYEFPDDEELPQSLGRWLLRVQLDSKVMIDKKLPMKEIGETIYREFDNDEL 351
DK WVSDYYEFPDD ++ LG WLLR+QL++K++ DKKL MKEIG+ I EF DEL
Sbjct 1219 EADKSWVSDYYEFPDDADITSRLGTWLLRIQLNNKLVTDKKLSMKEIGDKILMEFSKDEL 1278
Query 352 DCIWTDDNSDELVLRIRIKK------------HGQEQDPNSDDQSSEI-ENRFLQKLMLH 398
DCIWTDDNSDELVLR+RIK +E D S +S + E++FL+KLM
Sbjct 1279 DCIWTDDNSDELVLRLRIKNIEPTNNIRDNIHSSEENDSISPSITSGVEEHKFLEKLMTE 1338
Query 399 CLVGITLRGVSRITKVYMREEARTLYNETTGKFERVNNWVLDTDGCNLDEVLTCPRVDST 458
CL ITLRG++ I KVYM+EE + Y+ + K R N WVLDTDGCNL+ VL +DST
Sbjct 1339 CLSQITLRGINNIKKVYMKEEQVSRYDSVSQKMVRDNQWVLDTDGCNLEAVLCHTAIDST 1398
Query 459 RTTSNDITEIFDVLGIEAVRRALLRELRAVISFDGSYVNYRHLAILCDTMTQKGYLMSIT 518
RT SNDITE+F VLGIEAVRRALLRELR VISFDGSYVNYRHLA+LCD MTQKG+LMSIT
Sbjct 1399 RTISNDITEVFSVLGIEAVRRALLRELRTVISFDGSYVNYRHLALLCDNMTQKGHLMSIT 1458
Query 519 RHGINRVEKGPLKKCSFEETVEILMEAAVFAETDHLRGVTENIMLGQLCPLGTGDVDLLI 578
RHGINRV+KGPL+KCSFEETVE+LM+AA+F ETD+L GV+EN+MLGQL P GT D+LI
Sbjct 1459 RHGINRVDKGPLQKCSFEETVEVLMDAAMFGETDYLNGVSENVMLGQLAPYGTACFDVLI 1518
Query 579 DEEKLKDAHRAVEPQQDLALEGLASPGGADGMSPDGSGTPSPHNVTSVFSPM-PFSTVYS 637
D +KL+D +E + A G S S SG + S SP+ P S +Y
Sbjct 1519 DPDKLRDTATHLEIHGEFAKLGKFSTLSQTTRSYSDSGAFESDSFESPMSPLSPMSPLYQ 1578
Query 638 SF--------------AQSPSNPLSPTSPSA 654
S+ +P +P+SP SP
Sbjct 1579 SYEPMSPMISGQFSPVQMTPRSPMSPVSPGG 1609
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 301129696359
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40