bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0997_orf1 Length=177 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI1020c 248 5e-65 > 5833.PFI1020c Length=510 Score = 248 bits (634), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 120/177 (67%), Positives = 147/177 (83%), Gaps = 1/177 (0%) Query 1 NKQLLVGAALSTRAADLERAKALLQVGADVLVVDSSQGDSVFQVDIVKQLKSAYPNTQII 60 NKQL+VGA++STR DLERA L++ DV+ +DSSQG+S++Q+D +K++KSA+P+ II Sbjct 224 NKQLIVGASISTREHDLERANQLIKNMIDVICIDSSQGNSIYQIDTIKKIKSAHPDIPII 283 Query 61 GGNVVTARQAKSLIDAGVDALRIGMGSGSICTTQVVCAVGRAQATAVYHVSKYAREVANI 120 GGNVVT++QAK+LIDAG D LRIGMGSGSICTTQ VCAVGRAQ TAVYHVSKYA NI Sbjct 284 GGNVVTSQQAKNLIDAGADVLRIGMGSGSICTTQDVCAVGRAQGTAVYHVSKYAH-TRNI 342 Query 121 PCIADGGIQNSGHVVKALALGASTVMVGSLLAATEEAPGAYYFHNGARVKSYRGMGS 177 IADGGI+NSG++VKAL+LGA VM+G+LLAATEE+ YYF N R+K YRGMGS Sbjct 343 KTIADGGIKNSGNIVKALSLGADFVMLGNLLAATEESCSEYYFENNVRLKIYRGMGS 399 Lambda K H 0.317 0.130 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 35195248557 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40