bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0994_orf1 Length=165 Score E Sequences producing significant alignments: (Bits) Value 5207.CNC00350 148 7e-35 > 5207.CNC00350 Length=154 Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 89/164 (54%), Positives = 109/164 (66%), Gaps = 10/164 (6%) Query 2 MAPKEKAPAKGSKAAVEKKVKKAQAVGKALKKPGRTATAKARYTVRFRRPRTLKKPRTPK 61 MAP + A G AA + VK A ALK T+ K R +V F RP TL+ PR PK Sbjct 1 MAPSKTA---GKAAAKPQDVKAKAAKKAALKGTQSTSVRKVRTSVTFHRPSTLRLPRAPK 57 Query 62 APRLARLWAANPIAALQRNDKYRVLQHPVTTESAMKKIEETNTLVFLCDPRASKRRIKEA 121 PR + + L R D++R +QHP+ TESAMKKIEE NTLVF+ D +A+KR IK+A Sbjct 58 YPRKS-------VHHLPRMDQFRTIQHPLNTESAMKKIEEHNTLVFIVDIKANKRNIKDA 110 Query 122 VKETYGVVAQRVNTLIRVDGKKKAYVRLTPEFDALDVANKIGII 165 VK+ Y V A +VNTLIR DG+KKAYVRLT +FDAL+VANKIG I Sbjct 111 VKKLYDVEAAKVNTLIRPDGRKKAYVRLTADFDALEVANKIGFI 154 Lambda K H 0.316 0.129 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29254071491 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40