bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0992_orf1 Length=246 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.118 150 4e-35 > 5833.MAL13P1.118 Length=1139 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 0/175 (0%) Query 3 HDVLTFKVLSHTSCNIFASLAKDEILEVRSNMISLILATDMKSHFGAINRLRAARQNPHF 62 H +TFK+L CNI + ++ + +RS +I LIL+TDMK HF I++ R R+N F Sbjct 920 HASITFKILQLNQCNILKNFSEKDFRMMRSYIIELILSTDMKHHFEIISKFRIRRENEDF 979 Query 63 DHRKQRDDTWLIMEMCMRAADIGHSILSWDQHFEWSSRVTAEFYLQGDEEARHGRGISPL 122 D+ K DD ++ +M +++ADI H +SW +H+ W RV +EFY QGDEE ++ +SPL Sbjct 980 DYIKNSDDLLILTKMIIKSADISHGSVSWSEHYCWCQRVLSEFYTQGDEELKNKMPLSPL 1039 Query 123 CDRDLHSSMARNQVGFLEHLVKPLFVELHSVDSMKGAFQEAVNTIDANISRWQQL 177 CDR H+ + ++Q+ FL+ +V PLF EL +D+ K + +++N W L Sbjct 1040 CDRTKHNEVCKSQITFLKFVVMPLFEELSHIDNNKFIKSFCLKRLNSNCIMWDTL 1094 Lambda K H 0.323 0.134 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 73210338641 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40