bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0974_orf1 Length=247 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL0310c 197 2e-49 > 5833.PFL0310c Length=984 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 93/158 (58%), Positives = 117/158 (74%), Gaps = 0/158 (0%) Query 2 VMAATKALQRGDWSDCARHIWSLSIWDKMFNKEHIQQMLLQKIKAEAMRTYIFTYLSLYD 61 ++ ATK LQ+G+W C I+SLSIW K +KE +Q +L +KIK EAMRTYIF Y+S+Y+ Sbjct 790 IILATKHLQKGNWKLCCEKIFSLSIWPKFPDKEKVQNILKEKIKQEAMRTYIFRYISIYE 849 Query 62 SFAIGQLASMFDLSLNAVHSIVSKMMINEEIHASWDETSQFILISRVKHTRLQQLALTLA 121 SF+I QL MFDL+ N VHSI+SKMMIN+EI A W+E+S+FILIS+V T LQ LAL LA Sbjct 850 SFSIDQLCVMFDLNQNVVHSILSKMMINQEIPAFWNESSKFILISKVNPTTLQNLALKLA 909 Query 122 ENVANAVEQNELTLNMKNPKFALTHERRFMRDGDRAGW 159 ENV +EQNEL LNMKNPKF ERR +++ W Sbjct 910 ENVNEVMEQNELALNMKNPKFMFMQERRTQMKEEKSNW 947 Lambda K H 0.321 0.136 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 73815382762 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40