bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0949_orf1 Length=156 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_3050 202 2e-51 > 5807.cgd1_3050 Length=459 Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 90/148 (60%), Positives = 117/148 (79%), Gaps = 0/148 (0%) Query 1 LGDLLQNIGVMIASAIIWYNPEYSIADPACTLLFSMFVILTTISIIREAVNVLMEGTPVG 60 LGD+LQNIGVMIA +I YNP ++IADP CT+LFS FV+ TTI I++++ NVLMEGTP+G Sbjct 290 LGDILQNIGVMIAGLLILYNPAWTIADPLCTILFSFFVLATTIKILKDSANVLMEGTPIG 349 Query 61 LDVAVLQSDLVSLRGVLEVHDLHVWSISIGRPALACHLVVCDEEAARRVLRAATLLCQRK 120 +D +Q+D + L VLEVHDLHVWS+S+G PAL+CH+VV E+ AR LR AT LCQ+K Sbjct 350 IDCESIQNDFLKLSSVLEVHDLHVWSVSVGVPALSCHIVVASEDNARFTLRYATDLCQKK 409 Query 121 HGILHTTIQTDFSSDASCCDTEAHQKCM 148 +GI HTTIQ D+S + + C+T HQKC+ Sbjct 410 YGIFHTTIQIDYSPNKATCETIHHQKCL 437 Lambda K H 0.325 0.137 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 24371502831 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40