bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0947_orf1 Length=238 Score E Sequences producing significant alignments: (Bits) Value 9258.ENSOANP00000015772 380 2e-104 > 9258.ENSOANP00000015772 Length=211 Score = 380 bits (975), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 184/211 (87%), Positives = 198/211 (93%), Gaps = 0/211 (0%) Query 13 SKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEKGRR 72 SK+RKF+NDGVF AELNEFLSRTLAEDGYSGVEVR+TP+RTEII+RATRTREVLGEK RR Sbjct 1 SKRRKFINDGVFNAELNEFLSRTLAEDGYSGVEVRITPVRTEIIMRATRTREVLGEKARR 60 Query 73 IRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRH 132 IRELTSLVQKRFGF PDSVEL+AERVENRGLCAMAQAESLRYKLLKGLAVRRA YGVLRH Sbjct 61 IRELTSLVQKRFGFSPDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 120 Query 133 IMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVLGVR 192 IMESGAKGCEVVVSGKLRAQRAKSMKF+DGY+ISTG+P FV+ A RSVQLRQGVLGVR Sbjct 121 IMESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGQPANTFVNSATRSVQLRQGVLGVR 180 Query 193 VSIMLPFDPEGKMGPSTPLPDTIIVSEPKPE 223 V IMLP DPEG+MGPST LPD+I+V +PKPE Sbjct 181 VKIMLPHDPEGRMGPSTILPDSIVVLDPKPE 211 Lambda K H 0.320 0.137 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 69258123258 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40