bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0917_orf1 Length=265 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0351 358 7e-98 > 5833.PF11_0351 Length=663 Score = 358 bits (920), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 177/241 (73%), Positives = 204/241 (84%), Gaps = 0/241 (0%) Query 1 KGVNPDEAVAAGAAIQAGVLKGEIKDLLLLDVCPLSLGIETLGGVFTRLINRNTTIPTKK 60 KGVNPDEAVA GAAIQ GVLKGEIKDLLLLDV PLSLGIETLGGVFT+LINRNTTIPTKK Sbjct 397 KGVNPDEAVALGAAIQGGVLKGEIKDLLLLDVIPLSLGIETLGGVFTKLINRNTTIPTKK 456 Query 61 SQIFSTAADNQTQVGIKVYQGEREMASANKLLGQFDLVGIPPAPRGVPQIEVTFDVDANG 120 SQIFSTAADNQTQV IKV+QGEREMAS NKLLG FDLVGIPPAPRGVPQIEVTFDVDAN Sbjct 457 SQIFSTAADNQTQVSIKVFQGEREMASDNKLLGSFDLVGIPPAPRGVPQIEVTFDVDANA 516 Query 121 IMNISAVDKSTGKRQQITIQSSGGLSEAQIKQMVEDAERFKDEDQRQKDLVAAKNEAETL 180 I+NISA+DK T K+QQITIQSSGGLS+ +I++MV++AE +++DQ +K+L +KNEAETL Sbjct 517 IINISAIDKMTNKKQQITIQSSGGLSKEEIEKMVQEAELNREKDQLKKNLTDSKNEAETL 576 Query 181 VYSVEKQISDLKDKISAEDKTDLESRIQELRSALVEGELETIRSRVKALQELSWKVSQQA 240 +YS EKQ+ D KDKIS DK +L +I LR L +L++I+ K LQE SW +SQ+ Sbjct 577 IYSSEKQLEDFKDKISDSDKDELRQKITVLREKLTSEDLDSIKDATKQLQEKSWAISQEM 636 Query 241 Y 241 Y Sbjct 637 Y 637 Lambda K H 0.308 0.126 0.330 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 83755957455 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40