bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0905_orf1
Length=403
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0272 586 4e-166
> 5833.PF10_0272
Length=386
Score = 586 bits (1511), Expect = 4e-166, Method: Compositional matrix adjust.
Identities = 273/384 (71%), Positives = 325/384 (84%), Gaps = 2/384 (0%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKFERPRHGSLGF PRKRC+R RGK+++FPKDD KPPH TAFMGYKAGMTHIVREV
Sbjct 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
++PGSKLHKKE+VEA TI+E PMV VG+VGY ETP+GLR LSTVWA H+S+E RRR+YK
Sbjct 61 DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120
Query 136 NWYKSKKKAFTRYSKKYAENNKMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHIMEI 195
NWYKS+KKAFT+ S E K + I+++C V+RAICHTQPSKTP ++KAHIME+
Sbjct 121 NWYKSEKKAFTK-SLNVPEATK-NCLLKRIEKYCTVLRAICHTQPSKTPLRMKKAHIMEV 178
Query 196 QVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLPRK 255
Q+NGG++ +K++FV +M E +P+S VF +EM+DVI VTKGHG KGVVSR+GV RLPRK
Sbjct 179 QINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKRLPRK 238
Query 256 THRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNGSTDADLT 315
THRGLRKVACIGAWHPARVQFQ+PRHGQKGYFHRTE NKK+YRIG +D + STDAD+T
Sbjct 239 THRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIGLKTDKNSASTDADIT 298
Query 316 EKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIHLKFIDT 375
EK+ITPMGGFPHYG V DF+++KGC+ G KKRPIT+RK +VP+ SR AL + LKFIDT
Sbjct 299 EKKITPMGGFPHYGVVNEDFLLLKGCVAGTKKRPITLRKNIVPQVSRDALAQVSLKFIDT 358
Query 376 SSKWGHGRFQTSDEKAKFYGPLKR 399
SSK GHGRFQTS+EK K+YGPLK+
Sbjct 359 SSKIGHGRFQTSEEKVKYYGPLKK 382
Lambda K H
0.322 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 161787373293
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40