bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0905_orf1 Length=403 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0272 586 4e-166 > 5833.PF10_0272 Length=386 Score = 586 bits (1511), Expect = 4e-166, Method: Compositional matrix adjust. Identities = 273/384 (71%), Positives = 325/384 (84%), Gaps = 2/384 (0%) Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75 MSHRKFERPRHGSLGF PRKRC+R RGK+++FPKDD KPPH TAFMGYKAGMTHIVREV Sbjct 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60 Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135 ++PGSKLHKKE+VEA TI+E PMV VG+VGY ETP+GLR LSTVWA H+S+E RRR+YK Sbjct 61 DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120 Query 136 NWYKSKKKAFTRYSKKYAENNKMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHIMEI 195 NWYKS+KKAFT+ S E K + I+++C V+RAICHTQPSKTP ++KAHIME+ Sbjct 121 NWYKSEKKAFTK-SLNVPEATK-NCLLKRIEKYCTVLRAICHTQPSKTPLRMKKAHIMEV 178 Query 196 QVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLPRK 255 Q+NGG++ +K++FV +M E +P+S VF +EM+DVI VTKGHG KGVVSR+GV RLPRK Sbjct 179 QINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKRLPRK 238 Query 256 THRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNGSTDADLT 315 THRGLRKVACIGAWHPARVQFQ+PRHGQKGYFHRTE NKK+YRIG +D + STDAD+T Sbjct 239 THRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIGLKTDKNSASTDADIT 298 Query 316 EKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIHLKFIDT 375 EK+ITPMGGFPHYG V DF+++KGC+ G KKRPIT+RK +VP+ SR AL + LKFIDT Sbjct 299 EKKITPMGGFPHYGVVNEDFLLLKGCVAGTKKRPITLRKNIVPQVSRDALAQVSLKFIDT 358 Query 376 SSKWGHGRFQTSDEKAKFYGPLKR 399 SSK GHGRFQTS+EK K+YGPLK+ Sbjct 359 SSKIGHGRFQTSEEKVKYYGPLKK 382 Lambda K H 0.322 0.137 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 161787373293 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40