bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0884_orf3
Length=756
Score E
Sequences producing significant alignments: (Bits) Value
7719.ENSCINP00000005901 318 6e-85
> 7719.ENSCINP00000005901
Length=1187
Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 222/569 (39%), Positives = 290/569 (50%), Gaps = 80/569 (14%)
Query 210 AFDCSQCSVNATC-DPLGA-TCQCKPGFRGDGTQCEAFNPCEGETAPCDANATCTADGND 267
A + C NA C + +G+ TC CK GF G+G C + C T CD NA CT
Sbjct 19 ALNTDNCDTNANCTNTIGSFTCACKTGFTGNGVNCTDIDECALNTDNCDTNANCTNTIGS 78
Query 268 AKCHCNKGWNADSKAGASGHACVEEDECANNTHECPQHSTCVNTEGSYECNCLPGYQKDQ 327
C C G+ D G +C + DECA NT C ++ C NT GS+ C C G+ D
Sbjct 79 FTCTCKTGFTGD------GVSCTDIDECALNTDNCHTNANCTNTVGSFTCTCKTGFSGDG 132
Query 328 DGKCQDIDECA-GEHGCPAHSTCVNTAGSFECKCDAGFSGSATSESPCSNIDEC-QDPDA 385
C DIDECA + C ++ C NT GSF C C GFSG+ T+ C ++DEC + D
Sbjct 133 -VSCTDIDECALNTNNCDTNANCTNTIGSFTCTCTTGFSGNGTT---CIDLDECALNTDN 188
Query 386 CSANAICADTEGSFTCSCPEGYSGGGSHDSPCSKIDYCADPTLNTCGAHSTCVNTLTTFK 445
C+ NA C +T GSFTC+C G++G G C+ ID CA T N C ++ C NT+ +F
Sbjct 189 CNINANCTNTIGSFTCTCKTGFTGDG---VTCTDIDECALNTDN-CITNANCTNTIGSFT 244
Query 446 CVCDAGYDGAGTHESPCVDIDECSKEKP-------------------------------- 473
C C G+ G G C DIDEC+
Sbjct 245 CTCKTGFTGNGV---TCTDIDECALNTDNCNTNANCTNTIGSFTCTCKTGFTGDGVTCTD 301
Query 474 -------SNDCNRNAVCTNTEGSYTCACKEGFSGEGFGAAGCADVDECA--NSPCDAHAS 524
+++C+ NA CTNT GS+TC CK GF+G+G C D+DECA CD +A+
Sbjct 302 IDECALNTDNCDTNANCTNTIGSFTCTCKTGFTGDG---VTCTDIDECALNTDNCDTNAN 358
Query 525 CANTEGSYVCTCNPGYEPASSDGHACKDVDECAAGTAECHVSAQCVNVDGSYECHCLEGF 584
C NT GS+ CTC G+ + DG +C D+DECA T C +A C N GS+ C C GF
Sbjct 359 CTNTIGSFTCTCKTGF---TGDGVSCTDIDECALNTDNCDTNANCTNTIGSFTCTCKTGF 415
Query 585 IGDGKVCSDVDECAAEASPCGANTHCLNTIGSYECECKDGYGHMEGNACSDIDECSEAST 644
G+G C+D+DECA C N +C NTIGS+ C CK G+ +G +C+DIDEC+ +
Sbjct 416 TGNGVTCTDIDECALNTDNCDTNANCTNTIGSFTCTCKTGF-TGDGVSCTDIDECALNTD 474
Query 645 EIPENCNCVNTEGSFSLEAKPGYELVDGKCVKIDFCARGACNSLAHCKENPEGTAAI--- 701
N NC NT GSF+ K G+ C ID CA + +CK N T I
Sbjct 475 NCDINANCTNTIGSFTCTCKTGFTGDGVSCTDIDECAL----NTDNCKINANCTNTIGSF 530
Query 702 -CTCIAGYSGDGTAQGHCDDIDECLAEND 729
CTC G++G+G C DIDEC D
Sbjct 531 TCTCKTGFTGNGVT---CTDIDECALNTD 556
Lambda K H
0.316 0.131 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 358191412700
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40