bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0837_orf2 Length=108 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_2330 83.2 2e-15 > 5807.cgd8_2330 Length=1143 Score = 83.2 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 0/81 (0%) Query 22 QALASDAFFAMCLVVAAAVVGLLGIVLDPVELKHLTLLGLSLIVGYYCVWAVTPSLHTPL 81 + + S+ F + ++ V LG ++D L ++ + LS+IVGYYC+W VTPSLHTPL Sbjct 1002 RVIYSNVSFGFFVFISVLVSIGLGYIIDHDTLGNILVFSLSVIVGYYCIWNVTPSLHTPL 1061 Query 82 MSVTNALSGVIVIGCMLEYLP 102 MSVTNALSG+I+IG MLE P Sbjct 1062 MSVTNALSGIIIIGAMLECGP 1082 Lambda K H 0.324 0.139 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22451482439 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40