bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0754_orf1 Length=356 Score E Sequences producing significant alignments: (Bits) Value 44689.DDBDRAFT_0206512 329 8e-89 > 44689.DDBDRAFT_0206512 Length=1036 Score = 329 bits (844), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 169/339 (49%), Positives = 233/339 (68%), Gaps = 11/339 (3%) Query 1 QTGGPDGDLGSNALLQTKSKTLAVVDGAGVVYDPEGLNAEELRRLARLRFKGEKTSSMLF 60 QTGGPDGDLGSN + +K KT+ +VDG+GV+ DP+GLN +E+ RLA ++ + F Sbjct 709 QTGGPDGDLGSNEIKISKDKTIGIVDGSGVLLDPQGLNRDEIGRLA-----SKRQMARYF 763 Query 61 DSSLLSPKGFKVPQDARDITLPDGTYVASGIEFRNNFHLSKFAVCDLFNPCGGRPASVNP 120 D S LSP+GF V D+ LP+G V SG+ FRNNFHL+ D+F PCGGRP SV Sbjct 764 DKSKLSPQGFFVDVAENDVKLPNGDIVESGLIFRNNFHLNPLCNADIFVPCGGRPESVQL 823 Query 121 RNVEQLFEQQTGLPKFKFIVEGANVFITDEARRELENRGVILFKDASTNKGGVTSSSMEV 180 NV+++F TG +F IVEGAN+F T +AR +E +G I+FKDAS NKGGVTSSS+EV Sbjct 824 TNVDKMF-TATGESRFPIIVEGANLFFTQKARLMIEEKGAIIFKDASANKGGVTSSSLEV 882 Query 181 LAALSLTEEEFDRHMRVKDPNNPPKFYKDYVEAILQRIQENARLEFEAIWNEAERTGMHK 240 LAAL+L +EEFDRHM VKD N P+FY++Y++ + I+ NARLEFE IW+E E T + Sbjct 883 LAALALNDEEFDRHMCVKD-NVVPEFYENYIKDVHHTIESNARLEFECIWSEHESTKTPR 941 Query 241 CDLTDILSQKINQLKTDMAGSSALWKDEALVNFVLTKSIPDVLVPGLISVETFRQRVPET 300 L+D+LS KIN L D +S+LW D++L +++ + P VL+ L+ V+ +RVPE Sbjct 942 SILSDLLSNKINSL-NDSIQTSSLWTDQSLRRKIISAACPKVLL-NLLGVDKIMERVPEP 999 Query 301 YQRAIFTTFLASRFLYKQPFTAEASAFAFIAYLDEIRSQ 339 Y +AIF ++LASRF+YK + ++ FAF Y++ ++ Q Sbjct 1000 YVKAIFGSYLASRFVYK--YGLNSNEFAFYTYMETLKQQ 1036 Lambda K H 0.317 0.133 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 135090200859 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40